gene_sets {tidyestimate}

Gene sets to infer tumor stromal and immune infiltration

Description

Two gene sets, each 141 genes in length, created to infer stromal and immune infiltration

Usage

gene_sets

Format

A data frame with 141 row and 2 variables:

stromal_signature

Geneset of HGNC symbols used to infer tumor stromal cell infiltration

immune_signature

Geneset of HGNC symbols used to infer tumor immune cell infiltration

Source

https://r-forge.r-project.org/scm/viewvc.php/pkg/estimate/data/SI_geneset.RData?root=estimate&view=log