Tidy Common Workflow Language Tools and Workflows
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Documentation for package ‘tidycwl’ version 1.0.7
Help Pages
| cwl_output | Shiny bindings for tidycwl |
| export_html | Export the workflow plot as HTML |
| export_image | Export the workflow plot as PNG, JPEG, or PDF files |
| get_cwl_version | Get CWL version |
| get_edges | Get edges in a CWL workflow into a data frame |
| get_graph | Get the CWL workflow graph |
| get_inputs_id | Get ID for inputs |
| get_inputs_label | Get label for inputs |
| get_nodes | Get nodes in a CWL workflow into a data frame |
| get_outputs_id | Get ID for outputs |
| get_outputs_label | Get label for outputs |
| get_steps_doc | Get documentation/description for steps |
| get_steps_id | Get ID for steps |
| get_steps_label | Get label for steps |
| get_steps_revision | Get revision number for steps |
| get_steps_version | Get toolkit version for steps |
| is_cwl | Is this a CWL object? |
| is_draft2 | Is this CWL draft2? |
| is_tool | Is this a CWL command line tool? |
| is_v1.0 | Is this CWL v1.0? |
| is_v1.1 | Is this CWL v1.1? |
| is_workflow | Is this a CWL workflow? |
| parse_cwl | Parse a CWL workflow |
| parse_inputs | Parse the inputs of the CWL workflow into a data frame |
| parse_meta | Parse the metadata in the CWL workflow |
| parse_outputs | Parse the outputs of the CWL workflow into a data frame |
| parse_steps | Parse the steps of the CWL workflow into a data frame |
| parse_type | Parse CWL content type |
| print.cwl | Print CWL objects |
| read_cwl | Read a CWL file into a list |
| read_cwl_json | Read a CWL file (JSON format) into a list |
| read_cwl_yaml | Read a CWL file (YAML format) into a list |
| render_cwl | Shiny bindings for tidycwl |
| tidycwl_shiny | Shiny bindings for tidycwl |
| visualize_graph | Visualize the CWL workflow |