rSSR_plot {telemetR}

Plot the rSSR Curve and Convergence Thresholds and Optimum MBP

Description

Using the dataframes produced by renorm_SSR and opt_mbp, plots the rSSR curve, and all the convergence thresholds (horizontal lines) and corresponding optimum mbps (vertical lines).

Usage

rSSR_plot(rSSR_df, opt_mbp_df, var_groups = NULL)

Arguments

rSSR_df

a dataframe created by created by renorm_SSRduration compare showing the renormalized sum of squares of the residuals between one potential blanking period and the next.

opt_mbp_df

a dataframe created by opt_mbp showing the values for the convergence thresholds and optimum mbps

var_groups

a single string or vector of strings of the columns which should be used to group organisms. Common groupings are species and cohorts.

Value

A plot of the rSSR curve, convergence thresholds, and optimum mbps

Examples

#plot the rSSR and log(rSSR) curves
rSSR_plot(rSSR_df = ex_rSSR,
          opt_mbp_df = ex_opt,
          var_groups = "fish_type")