superbiclust-package |
generating robust biclusters form the set of biclusters |
BiclustSet |
Class 'BiclustSet' |
BiclustSet-class |
Class 'BiclustSet' |
BiclustSet-method |
Constructor of BiclustSet object |
BiclustSet-methods |
Constructor of BiclustSet object |
combine |
Combine two Biclust objects into one |
getStats |
Get frequency statistic for the columns and rows membership |
HCLtree |
Hierarchical structure of bicluster output |
jaccardMat |
Jaccard similarity Matrix for bicluster output |
kulczynskiMat |
Kulczynski similarity Matrix for bicluster output |
ochiaiMat |
Ochiai similarity Matrix for bicluster output |
plotProfilesAcrossAllSamples |
Plot Gene Expression Profiles Across All Samples of the Original Data |
plotProfilesWithinBicluster |
Plot Gene Expression Profiles within a (Core) Bicluster |
plotSuper |
Plot gene profiles within biclusters |
plotSuperAll |
Plot gene profiles for all samples in the data |
sensitivityMat |
Sensitivity Matrix for bicluster output |
show-method |
Class 'BiclustSet' |
similarity |
Similarity Matrix for bicluster output |
sorensenMat |
Sorensen similarity Matrix for bicluster output |
specificityMat |
Specificity Matrix for bicluster output |
summary-method |
Class 'BiclustSet' |
superbiclust |
generating robust biclusters form the set of biclusters |