plot.wilma {supclust}R Documentation

2-Dimensional Visualization of Wilma's Output

Description

Yields a projection of the cases (for example n gene expression profiles) into the space of the first two gene group centroids that were identified by wilma.

Usage

## S3 method for class 'wilma'
plot(x, xlab = NULL, ylab = NULL, col = seq(x$yvals),
           main = "2-Dimensional Projection of Wilma's Output", ...)

Arguments

x

an R object of class "wilma", typically the result of wilma().

xlab

character string, giving the annotation of the x-axis.

ylab

character string, giving the annotation of the x-axis.

col

a numeric vector of length 2, coding the colors that will be used for plotting the class labels.

main

a character string, giving the title of the plot.

...

Further arguments passed to and from methods.

Author(s)

Marcel Dettling, dettling@stat.math.ethz.ch

See Also

wilma, also for references.

Examples

 ## Running the examples of Wilma's help page
 example(wilma, echo = FALSE)
 plot(fit)
[Package supclust version 1.1-1 Index]