eempf_plot_comps {staRdom} | R Documentation |
Plot all components of PARAFAC models
Description
The components can be plottet in two ways: either as a colour map or as two lines (emission, excitation wavelengths) intersecting at the component maximum. If the list of provided models is named, these names are shown in the plot. Otherwise, the models are automatically named by "model#".
Usage
eempf_plot_comps(
pfres,
type = 1,
names = TRUE,
contour = FALSE,
colpal = "default",
...
)
Arguments
pfres |
list of PARAFAC models |
type |
1 for a colour map and 2 for em and ex wavelength loadings |
names |
logical, whether names of components should be written into the plot |
contour |
in case of 3 dimensional component plots, contours are added |
colpal |
"default" to use the viridis colour palette, "rainbow" to use a subset of the rainbow palette, any custom vector of colors or a colour palette. A gradient will be produced from this vector. Larger vectors (e.g. 50 elements) can produce smoother gradients. |
... |
arguments passed on to other functions, e.g. |
Value
object of class ggplot
Examples
data(pf_models)
eempf_plot_comps(pf4, type = 1)
# use a different colour scheme:
# eempf_plot_comps(pf4, type = 1, colpal = heat.colors(50))
eempf_plot_comps(pf4, type = 2)
eempf_plot_comps(list(pf4[[1]],pf4[[1]]), type=1)