Functions and Datasets for "Introduction to Scientific Programming and Simulation Using R"

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Documentation for package ‘spuRs’ version 2.0.2

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bisection A function of the bisection algorithm.
booking_clerkMC A function to simulate the harassed booking clerk Markov chain.
CMCSimulation A function to simulate a continuous time Markov chain.
fitDistances Function to fit a model to seed transect distance/count data.
fixedpoint A function of the fixed point algorithm.
fixedpoint_show A function of the fixed point algorithm.
kew 303 years of monthly rainfall data from Kew Gardens, London, U.K.
MCEstimation A function to estimate the transition matrix for a discrete time Markov chain.
MCSimulation A function to simulate a discrete time Markov chain.
mean.transectHolder Function to compute the mean dispersal distance along a transect of seed traps.
mean.trapTransect Function to compute the mean dispersal distance along a transect of seed traps.
newtonraphson A function of the Newton-Raphson algorithm.
newtonraphson_show A function of the Newton-Raphson algorithm, plotting the path.
prime Function to assess whether or not an integer is prime.
primesieve Function to identify all the primes in a vector of positive integers.
print.transectHolder Function to print a transectHolder object usefullly.
print.trapTransect Function to print a trapTransect object usefullly.
RK4adapt A function which uses the Fourth order Runge-Kutta method with adaptive step size to solve a system of ODE's.
sd.transectHolder Function to compute the sd dispersal distance along a transect of seed traps.
simulate.transectHolder Function to simulate a modelled seed rain from a transectHolder
transectHolder Function to construct an object representing a collection of trapTransect objects.
trapTransect Function to construct an object representing a transect of seedtraps.
treeg Grand fir tree growth data from northern and central Idaho, USA.
trees von Guttenberg Norway spruce tree measurement data
ufc Upper Flat Creek forest cruise tree data
ufc.plots Upper Flat Creek forest cruise plot data
vol.m3 Function to compute the volume of a tree bole assuming a particular shape.