bi_NN_G |
Bivariate Nearest Neighbor G(r) |
bi_pair_correlation |
Bivariate Pair Correlation Function |
bi_ripleys_k |
Bivariate Ripley's K |
bi_ripleys_k_WSI |
Bivariate Ripley's K for Whole Slide Images |
compute_metrics |
Calculate Count Based Measures and NN Measures of Spatial Clustering for IF data |
create_mif |
Create Multiplex Immunoflourescent object |
dixons_s |
Dixon's S Segregation Statistic |
example_clinical |
Clinical variables of 229 patients |
example_spatial |
Example list of 5 spatial TMA data |
example_summary |
Marker summaries of 229 samples |
interaction_variable |
Bivariate Interaction Variable |
merge_mifs |
Merge several MIF objects together |
NN_G |
Univariate Nearest Neighbor G(r) |
pair_correlation |
Univariate Pair Correlation Function |
plot_immunoflo |
Generate plot of TMA point process |
ripleys_k |
Calculate Ripley's K |
subset_mif |
Subset mif object on cellular level |