A Lightweight Wrapper for 'Slurm'


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Documentation for package ‘slurmR’ version 0.5-4

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slurmR-package A Lightweight Wrapper for 'Slurm'
$.slurm_status Check the status of a Slurm JOB
docker_available slurmR docker image
expand_array_indexes Expand Array Indexes
JOB_STATE_CODES Slurm Job state codes
last_job Creating Slurm jobs
last_submitted_job Creating Slurm jobs
makeSlurmCluster Create a Parallel Socket Cluster using Slurm
new_rscript General purpose function to write R scripts
new_slurm_job Creating Slurm jobs
opts_slurmR Get and set default options for 'sbatch' and 'slurmR' internals
parse_flags Utility function
parse_flags.default Utility function
parse_flags.list Utility function
print.slurm_job Creating Slurm jobs
random_job_name Generate a random job name
read_sbatch Read a slurm batch file and capture the SBATCH options
read_slurm_job Creating Slurm jobs
sacct R wrappers for _Slurm_ commands
sacct.default R wrappers for _Slurm_ commands
sacct.slurm_job R wrappers for _Slurm_ commands
sacct_ R wrappers for _Slurm_ commands
sbatch R wrappers for _Slurm_ commands
sbatch.character R wrappers for _Slurm_ commands
sbatch.slurm_job R wrappers for _Slurm_ commands
scancel R wrappers for _Slurm_ commands
scancel.default R wrappers for _Slurm_ commands
scancel.slurm_job R wrappers for _Slurm_ commands
SchedulerParameters R wrappers for _Slurm_ commands
slurm.conf R wrappers for _Slurm_ commands
slurmR A Lightweight Wrapper for 'Slurm'
slurmr_cmd Source an R script as a Slurm job
slurmr_docker slurmR docker image
slurmr_docker_pull slurmR docker image
slurmr_docker_run slurmR docker image
slurmr_docker_stop slurmR docker image
slurm_available R wrappers for _Slurm_ commands
Slurm_clean Clean a session.
Slurm_collect Collect the results of a slurm job
Slurm_collect.slurm_job Collect the results of a slurm job
Slurm_env A wrapper of Sys.getenv
Slurm_EvalQ Submit an expression to be evaluated to multiple jobs.
slurm_job Creating Slurm jobs
Slurm_lapply The Slurm version of the '*apply' family of functions.
Slurm_log Check the R logfile of a job.
Slurm_Map The Slurm version of the '*apply' family of functions.
Slurm_sapply The Slurm version of the '*apply' family of functions.
snames Full path names for Slurm jobs
sourceSlurm Source an R script as a Slurm job
squeue R wrappers for _Slurm_ commands
squeue.default R wrappers for _Slurm_ commands
squeue.slurm_job R wrappers for _Slurm_ commands
status Check the status of a Slurm JOB
status.default Check the status of a Slurm JOB
status.slurm_job Check the status of a Slurm JOB
stopCluster.slurm_cluster Create a Parallel Socket Cluster using Slurm
submit R wrappers for _Slurm_ commands
the_plan Check for possible actions for a 'slurm_job' wrapper
wait_slurm Wait for a Slurm job to be completed
wait_slurm.integer Wait for a Slurm job to be completed
wait_slurm.slurm_job Wait for a Slurm job to be completed
WhoAmI Information about where jobs are submitted
whoami Information about where jobs are submitted
write_slurm_job Creating Slurm jobs