Slanted Matrices and Ordered Clustering


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Documentation for package ‘slanter’ version 0.2-0

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meristems Sample RNA data of similarity between batches of 1000 cells of tomato meristem cells.
oclust Hierarchically cluster ordered data.
reorder_frame Reorder the rows of a frame.
reorder_hclust Given a clustering of some data, and some ideal order we'd like to use to visualize it, reorder (but do not modify) the clustering to be as consistent as possible with this ideal order.
sheatmap Plot a heatmap with values as close to the diagonal as possible.
slanted_orders Compute rows and columns orders which move high values close to the diagonal.
slanted_reorder Reorder data rows and columns to move high values close to the diagonal.