BlandAltmanPlot {sistmr} | R Documentation |
Bland-Altman plot function
Description
Bland-Altman plot function
Usage
BlandAltmanPlot(
var1,
var2,
with_gradient = FALSE,
line_color = c("blue", "lightblue"),
extremum_pctg = TRUE
)
Arguments
var1 |
a vector of numerics for the 1rst group to be compared. |
var2 |
a vector of numerics for the 2nd group to be compared. |
with_gradient |
a logical indicating if you have a lot of measures, use |
line_color |
a vector of color for the three lines : average difference and upper and lower limits of the confidence interval for the average difference. |
extremum_pctg |
a logical indicating if you want to add the percentage of points outside the confidence interval for the upper and lower limits. Default is TRUE. |
Value
a ggplot2
object
Examples
library(ggplot2)
#Small sample
#Generate data
x <- rnorm(30)
y <- rnorm(30, mean = 5, sd = 3)
#Plotting
BlandAltmanPlot(var1 = x, var2 = y)
#Add color by group
gr <- c(rep("G1", 15), rep("G2", 15))
BlandAltmanPlot(var1 = x, var2 = y) + geom_point(aes(color = gr))
#High sample
#Generate data
x <- rnorm(10000)
y <- rnorm(10000, mean = 5, sd = 3)
#Plotting with gradient
BlandAltmanPlot(var1 = x, var2 = y, with_gradient = TRUE)
[Package sistmr version 0.1.1 Index]