get_D_KL {singleCellHaystack} | R Documentation |
Calculates the Kullback-Leibler divergence between distributions.
Description
Calculates the Kullback-Leibler divergence between distributions.
Usage
get_D_KL(classes, parameters, reference.prob, pseudo)
Arguments
classes |
A logical vector. Values are T is the gene is expressed in a cell, F is not. |
parameters |
Parameters of the analysis, as set by function 'get_parameters_haystack' |
reference.prob |
A reference distribution to calculate the divergence against. |
pseudo |
A pseudocount, used to avoid log(0) problems. |
Value
A numerical value, the Kullback-Leibler divergence
[Package singleCellHaystack version 1.0.2 Index]