standard {singR} | R Documentation |
Standardization with double centered and column scaling
Description
Standardization with double centered and column scaling
Usage
standard(data, dif.tol = 0.001, max.iter = 10)
Arguments
data |
input matrix with n x px. |
dif.tol |
the value for the threshold of scaling |
max.iter |
default value = 10 |
Value
standardized matrix with n x px.
Examples
spmwm = 3*matrix(rnorm(100000),nrow=100)+1
dim(spmwm)
apply(spmwm,1,mean) # we want these to be 0
apply(spmwm,2,mean) # we want these to be 0
apply(spmwm,2,sd) # we want each of these variances to be 1
spmwm_cp=standard(spmwm)
max(abs(apply(spmwm_cp,1,mean)))
max(abs(apply(spmwm_cp,2,mean)))
max(abs(apply(spmwm_cp,2,sd)-1))
[Package singR version 0.1.2 Index]