$-method |
Get element of 'Model"s 'params' list |
+-method |
Create an ExtendedMethod from an ExtendedMethod and MethodExtension |
+-method |
Create an ExtendedMethod from a Method and MethodExtension |
+-method |
Create a list of ExtendedMethod from a list of Methods and a MethodExtension |
add |
Add a reference to a simulation |
add-method |
Add a reference to a simulation |
add_bold |
Make a string bold in a certain format |
aggregate_evals |
Apply aggregator to a list of Evals objects |
Aggregator-class |
An S4 class for aggregating evaluated metrics |
as.data.frame.Evals |
Convert an Evals to a data.frame |
as.data.frame.listofEvals |
Convert a list of Evals to a data.frame |
as.data.frame.listofModels |
Convert a List of Models to a data.frame |
as.data.frame.Model |
Convert a Model to a data.frame |
catsim |
Concatenate and print for the simulator |
Component-class |
An S4 class representing a component of the simulator. |
create |
Create template for a new set of simulations |
describe |
Describe the contents of a simulator directory |
draws |
Get one or more draws from a simulation |
Draws-class |
An S4 class representing the random draws from a Model object. |
DrawsRef-class |
An S4 class representing a reference to an object of class Draws. |
evals |
Get one or more evals from a simulation |
Evals-class |
An S4 class representing the evaluation of a metric run by simulator. |
EvalsRef-class |
An S4 class representing a reference to an object of class Evals |
evaluate |
Evaluate outputs of methods according to provided metrics. |
evaluate_internal |
Evaluate outputs of methods according to provided metrics. |
evaluate_single |
Run one or more metrics on outputs. |
ExtendedMethod-class |
An S4 class representing the extension of a method |
generate_model |
Generate a model. |
get_contents |
Get the contents of a simulator directory |
get_files_not_in_simulations |
Find files in simulator directory not referred to by any simulations |
get_model_indices |
Returns indices of a specified subset of sim@model_refs |
get_relative_path |
Get relative path |
get_simulation_with_all_files |
Returns a simulation object containing references to all files in directory |
load-method |
Load a DrawsRef |
load-method |
Load an EvalsRef |
load-method |
Load a ModelRef |
load-method |
Load an OutputRef |
load-method |
Load a list of reference objects |
load_draws |
Load one or more draws objects from file. |
load_evals |
Load one or more Evals objects from file. |
load_evals_from_ref |
Load one or more Evals objects from file. |
load_model |
Load a model from file. |
load_simulation |
Load a simulation object |
make_my_example_model |
Make My Example Model |
memory_as_string |
Write memory in human readable way |
Method-class |
An S4 class representing a method to be run by simulator. |
MethodExtension-class |
An S4 class used to create an extended version of a method |
Metric-class |
An S4 class representing an evaluation metric to be used by simulator. |
model |
Get one or more models from a simulation |
Model-class |
An S4 class representing the model component of the simulator. |
ModelRef-class |
An S4 class representing a reference to an object of class Model. |
models_as_data.frame |
Convert a list of Model objects into a data.frame |
model_names |
Get model names in a Simulation |
my_example_loss |
My Example Loss |
my_example_method |
My Example Method |
new_aggregator |
Create an Aggregator object |
new_extended_method |
Create an ExtendedMethod object |
new_method |
Create a Method object |
new_method_extension |
Create an object that can be used to make an extended version of a method |
new_metric |
Create a Metric object |
new_model |
Create a Model object |
new_simulation |
Make a new simulation object |
output |
Get one or more outputs from a simulation |
Output-class |
An S4 class representing the output of a method run by simulator. |
OutputRef-class |
An S4 class representing a reference to an object of class Output. |
plot_eval |
Plot a metric's value for each method |
plot_evals |
Plot one metric versus another for each method |
plot_eval_by |
Plot a metric across multiple values of a model parameter |
recycle |
Recycles elements to create vector of desired length |
relabel |
Give simulation a new label |
rename |
Give simulation a new name |
run_extendedmethod_single |
Run a single extended method on a single index of simulated data. |
run_method |
Run one or more methods on simulated data. |
run_method_single |
Run a single method on a single index of simulated data. |
save_simulation |
Save a simulation object |
simulate_from_model |
Simulate from a model. |
simulate_from_model_single |
Simulate from a model. |
simulate_parallel |
Simulate from a model in parallel. |
Simulation-class |
An S4 class representing a simulation. |
subset_evals |
Reduce an Evals object to a subset of methods and/or metrics |
subset_models |
Subset Models |
subset_simulation |
Create a simulation that is a subset of a preexisting simulation object |
tabulate_eval |
Make a table of a metric for each pair of models and methods |