Simulate Complex Traits from Genotypes

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Documentation for package ‘simtrait’ version 1.1.3

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

simtrait-package	simtrait: simulate complex traits from genotypes
allele_freqs	Compute locus allele frequencies
cov_trait	The model covariance matrix of the trait
herit_loci	Per-locus heritability contribution from allele frequency and causal coefficient
pval_aucpr	Area under the precision-recall curve
pval_infl	Calculate inflation factor from p-values
pval_power_calib	Estimate calibrated power
pval_srmsd	Signed RMSD measure of null p-value uniformity
pval_type_1_err	Estimate type I error rate
rmsd	Root mean square deviation
simtrait	simtrait: simulate complex traits from genotypes
sim_trait	Simulate a complex trait from genotypes
sim_trait_mvn	Simulate traits from a kinship matrix under the infinitesimal model