signature_weight {signatureSurvival}

Weights of genes in a signature

Description

Weights of genes in a signature were estimated by using the following equation

w_i=\frac{log_{10}(p_i)}{\sum_{i=1}^g{log_{10}(p_i)}}

where p_i is p-value for Ward-test of gene i in survival analysis.

Usage

data("signature_weight")

Format

A data frame with 84 observations on the following 2 variables.

stage3_down

a character vector

weight.7

a numeric vector

Details

signature_weight is a matrix with g\times 2 or 3 where g is number of genes in a signature and there are two or three columns for gene id or gene name and weights.

Examples

data(signature_weight)