Oyster_plot_incr_CS {shelltrace} | R Documentation |
Plot the result of interpolation of sub-increments
Description
Formula that plots the result of the interpolation of digitized shell growth increments to reconstruct sub-increments to provide a check on the progress of the model. de Winter, N. J. (2017) <doi:10.5194/gmd-2017-137>
Usage
Oyster_plot_incr_CS(IncG, incr_matrix, Tstep)
Arguments
IncG |
Matrix of X- and Y-coordinates of all interpolated sub-increments |
incr_matrix |
Matrix listing characteristics of each digitized increment |
Tstep |
The step size (dt) in time (days) used to interpolate the existing shell increments |
Details
In order to prevent overcrowding the plot area and slowing the plotting process, only original shell increments and sub-increments halfway between original increments are plotted. Sub-increments are colored blue
Value
No data is exported, but a plot showing interpolated sub-increments is given in a separate window.
Note
Please cite Geoscientific Model Development paper dealing with the ShellTrace model
Author(s)
Niels J. de Winter
Source
GitHub
Manuscript
Supplementary data
Author website
References
de Winter, N. J.: ShellTrace v1.0 - A new approach for modelling growth and trace element uptake in marine bivalve shells: Model verification on pacific oyster shells (Crassostrea gigas), Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2017-137, in review, 2017.
Examples
Oyster_plot_incr_CS(IncG,incr_matrix3,Tstep=1)