HH_S5F {shazam}R Documentation

Human heavy chain, silent, 5-mer, functional targeting model.

Description

5-mer model of somatic hypermutation targeting based on analysis of silent mutations in functional heavy chain Ig sequences from Homo sapiens.

Usage

HH_S5F

Format

A TargetingModel object.

References

  1. Yaari G, et al. Models of somatic hypermutation targeting and substitution based on synonymous mutations from high-throughput immunoglobulin sequencing data. Front Immunol. 2013 4(November):358.

See Also

See HH_S1F for the 1-mer substitution matrix from the same publication; HKL_S5F for the human light chain 5-mer targeting model; MK_RS5NF for the mouse 5-mer targeting model; and U5N for the uniform 5-mer null targeting model.


[Package shazam version 1.2.0 Index]