summary.SGoF {sgof} | R Documentation |
Summary of a SGoF object
Description
Summary of the most important results given by the Conservative SGoF procedure.
Usage
## S3 method for class 'SGoF'
summary(object, ...)
Arguments
object |
A SGoF object. |
... |
Additional arguments affecting the summary produced. |
Value
Rejections |
The number of effects declared by SGoF. |
FDR |
The estimated false discovery rate. |
Adjusted.pvalues |
Table of adjusted p-values falling under gamma. |
Author(s)
Irene Castro Conde and Jacobo de Uña Álvarez
References
Castro Conde I and de Uña Álvarez J (2015). Adjusted p-values for SGoF multiple test procedure. Biometrical Journal; 57(1): 108-122. DOI: 10.1002/bimj.201300238
Dalmasso C, Broet P and Moreau T (2005) A simple procedure for estimating the false discovery rate. Bioinformatics 21:660–668
de Uña Álvarez J (2011). On the statistical properties of SGoF multitesting method. Statistical Applications in Genetics and Molecular Biology, Vol. 10, Iss. 1, Article 18.
See Also
Examples
p<-runif(387)^2 #387 independent p-values, non-uniform intersection null violated
res<-SGoF(p)
summary(res) #number of rejected nulls, estimated FDR