rvmeta.readScoreByRange {seqminer} | R Documentation |
Read score test statistics by range from METAL-format files.
Description
Read score test statistics by range from METAL-format files.
Usage
rvmeta.readScoreByRange(scoreTestFiles, tabixRange)
Arguments
scoreTestFiles |
character vector, score test output files (rvtests outputs using –meta score) |
tabixRange |
character, a text indicating which range in the VCF file to extract. e.g. 1:100-200 |
Value
score test statistics within given range
See Also
http://zhanxw.com/seqminer/ for online manual and examples
Examples
scoreFileName = system.file("rvtests/rvtest.MetaScore.assoc.anno.gz", package = "seqminer")
cfh <- rvmeta.readScoreByRange(scoreFileName, "1:196621007-196716634")
[Package seqminer version 9.4 Index]