getRefBase {seqminer}R Documentation

Annotate a test variant

Description

Annotate a test variant

Usage

getRefBase(reference, chrom, position, len = NULL)

Arguments

reference

path to the reference genome file (.fa file)

chrom

a vector of chromosome names

position

a vector of chromosome positions

len

a vector of length

Value

based extracted from the reference genome


[Package seqminer version 9.4 Index]