fa_rename {seqmagick}

fa_rename

Description

rename fasta sequence name

Usage

fa_rename(fasfile, mapping_file, position, sep, mode, outfile)

Arguments

fasfile

fasta file

mapping_file

mapping file

position

rename token at specific position

sep

sepator to divide token

mode

one of 'replace', 'prefix' or 'suffix'

outfile

output file

Value

BStringSet object

Author(s)

Guangchuang Yu