sensi_plot.tree.physig {sensiPhy}

Graphical diagnostics for class 'tree.physig'

Description

sensi_plot_tree.physig Plot results from tree_physig.

Usage

## S3 method for class 'tree.physig'
sensi_plot(x, graphs = "all", ...)

Arguments

x

output from tree_physig

graphs

choose which graph should be printed in the output ("all", 1 or 2)

...

further arguments to methods

Details

For 'x' from tree_physig

Graphs 1: Distribution of estimated phylogenetic signal (lambda or K) for each tree Red vertical line represents the average signal among all estimates.

Graph 2: Distribution of p-values for the phylogenetic signal (K or lambda) for each tree. Red vertical line represents the alpha significance level = 0.05.

Author(s)

Caterina Penone and Gustavo Paterno

See Also

ggplot, tree_phylm intra_phylm