sensi_plot.sensiTree_Intra {sensiPhy} | R Documentation |
Graphical diagnostics for class 'sensiIntra_Tree'
Description
plot_tree.intra_phylm
Plot results from tree_intra_phylm
,
tree_intra_phylm
and tree_intra_phyglm
Usage
## S3 method for class 'sensiTree_Intra'
sensi_plot(x, graphs = "all", uncer.type = "all", ...)
Arguments
x |
output from |
graphs |
choose which graph should be printed in the output ("all", 1, 2 or 3) |
uncer.type |
choose which uncertainty type should be printed ("all", "intra", "tree") |
... |
further arguments to methods |
Details
For 'x' from tree_intra_phylm
or tree_intra_phyglm
:
Graphs 1 and 2: Distribution of estimated estimates and intercepts for each tree (for tree_phylm
) or
value generated within a given interval (interaction_intra_tree_phylm
)
Red vertical line represents the mean estimate or intercept for all models.
Graph 3: Scatterplot with mean regression (black line) and standard deviation of the regression (blue dotted lines).
Author(s)
Caterina Penone and Gustavo Paterno
See Also
ggplot
, tree_phylm
intra_phylm