sensi_plot.sensiTree {sensiPhy}

Graphical diagnostics for class 'sensiTree'

Description

plot_tree.intra_phylm Plot results from tree_phylm, intra_phylm and intra_phyglm

Usage

## S3 method for class 'sensiTree'
sensi_plot(x, graphs = "all", ...)

Arguments

x

output from tree_phylm, tree_phyglm, intra_phylm or intra_phyglm

graphs

choose which graph should be printed in the output ("all", 1, 2 or 3)

...

further arguments to methods

Details

For 'x' from tree_phylm, tree_phyglm, intra_phylm or intra_phyglm:

Graphs 1 and 2: Distribution of estimated estimates and intercepts for each tree (for tree_phylm) or value generated within a given interval (intra_phylm) Red vertical line represents the mean estimate or intercept for all models.

Graph 3: Scatterplot with mean regression (black line) and standard deviation of the regression (blue dotted lines).

Author(s)

Caterina Penone and Gustavo Paterno

See Also

ggplot, tree_phylm intra_phylm