sensi_plot.samp.physig {sensiPhy} | R Documentation |
Graphical diagnostics for class 'samp.physig'
Description
plot_samp_phylm
Plot results from samp_physig
Usage
## S3 method for class 'samp.physig'
sensi_plot(x, graphs = "all", ...)
Arguments
x |
output from |
graphs |
choose which graph should be printed on the output ("all", 1,2 and 3 ) |
... |
further arguments to methods |
Details
For 'x' from samp_physig:
Graph 1: Estimated phylogenetic signal for each simulation across percentages of species removed. Colours represent percentage of change in comparison with the full data estimate (blue = lower than 5, orange = between 5 and 10 and red = higher than 10). The red horizontal line represents the original phylogenetic signal estimated from the full model (with all species).
Graph 2: The proportion of estimated signal in each category across the percentage of species removed.
Graph 3: The percentage of significant signal estimates across the percentage of species removed.
Author(s)
Gustavo Paterno
See Also
ggplot
, samp_phylm
samp_physig