IyenGreen {selectMeta}

Compute MLE and weight functions of Iyengar and Greenhouse (1988)

Description

Two parameteric weight functions for selection models were introduced in Iyengar and Greenhouse (1988):

w_1(x; \beta, q) = |x|^\beta / t(q, \alpha)

w_2(x; \gamma, q) = e^{-\gamma}

if |x| \le t(q, \alpha) and w_1(x; \beta, q) = w_2(x; \gamma, q) = 1 otherwise. Here, t(q, \alpha) is the \alpha-quantile of a t distribution with q degrees of freedom. The functions w_1 and w_2 are used to model the selection process that may be present in a meta analysis, in a model where effect sizes are assumed to follow a t distribution. We have implemented estimation of the parameters in this model in IyenGreenMLE and plotting in IyenGreenWeight. The functions normalizeT and IyenGreenLoglikT are used in computation of ML estimators and not intended to be called by the user. For an example how to use IyenGreenMLE and IyenGreenWeight we refer to the help file for DearBegg.

Usage

normalizeT(s, theta, b, q, N, type = 1, alpha = 0.05)
IyenGreenLoglikT(para, t, q, N, type = 1)
IyenGreenMLE(t, q, N, type = 1, alpha = 0.05)
IyenGreenWeight(x, b, q, type = 1, alpha = 0.05)

Arguments

s

Quantile where normalizing integrand should be computed.

theta

Vector containing effect size estimates of the meta analysis.

b

Parameter that governs shape of the weight function. Equals \beta for w_1 and \gamma for w_2.

q

Degrees of freedom in the denominator of w_1, w_2. Must be a real number.

N

Number of observations in each trial.

type

Type of weight function in Iyengar & Greenhouse (1988). Either 1 (for w_1) or 2 (for w_2).

alpha

Quantile to be used in the denominator of w_1, w_2.

para

Vector in R^2 over which log-likelihood function is maximized.

t

Vector of real numbers, t test statistics.

x

Vector of real numbers where weight function should be computed at.

Details

Note that these weight functions operate on the scale of t statistics, not p-values.

Value

See example in DearBegg for details.

Author(s)

Kaspar Rufibach (maintainer), [e-mail],
http://www.kasparrufibach.ch

References

Iyengar, S. and Greenhouse, J.B. (1988). Selection models and the file drawer problem (including rejoinder). Statist. Sci., 3, 109–135.

See Also

For nonparametric estimation of weight functions see DearBegg.

Examples

# For an illustration see the help file for the function DearBegg().