SETTINGS {seeds} | R Documentation |
Automatic Calculation of optimal Initial Parameters
Description
Implemented according to Engelhardt et al. 2017.
Usage
SETTINGS(
VARIANCE,
N,
BETA_LAMDBA,
alphainit,
betainit,
R = c(1000, 1000),
ROH = c(10, 10)
)
Arguments
VARIANCE |
standard error of the observed stat dynamics (per time point) |
N |
number of system states |
BETA_LAMDBA |
mcmc tuning parameter (weighting of observed states) |
alphainit |
mcmc tuning parameter (weighting of observed states) |
betainit |
mcmc tuning parameter (weighting of observed states) |
R |
mcmc tuning parameter |
ROH |
mcmc tuning parameter |
Details
The function can be replaced by an user defined version if necessary.
Value
A list of optimal initial parameters; i.e. R, Roh, Alpha, Beta, Tau, Lambda1, Lambda2
[Package seeds version 0.9.1 Index]