Spectral Clustering-Based Method for Identifying B Cell Clones

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Documentation for package ‘scoper’ version 1.3.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

as.data.frame-method	S4 class containing clonal assignments and summary data
ExampleDb	Example database
hierarchicalClones	Hierarchical clustering method for clonal partitioning
identicalClones	Sequence identity method for clonal partitioning
plot-method	S4 class containing clonal assignments and summary data
plotCloneSummary	Plot clonal clustering summary
print-method	S4 class containing clonal assignments and summary data
scoper	The SCOPer package
ScoperClones	S4 class containing clonal assignments and summary data
ScoperClones-class	S4 class containing clonal assignments and summary data
ScoperClones-method	S4 class containing clonal assignments and summary data
spectralClones	Spectral clustering method for clonal partitioning
summary-method	S4 class containing clonal assignments and summary data