propagateLabelsSolver {sccore} | R Documentation |
Propagate labels using Zhu, Ghahramani, Lafferty (2003) algorithm, "Semi-Supervised Learning Using Gaussian Fields and Harmonic Functions" <http://mlg.eng.cam.ac.uk/zoubin/papers/zgl.pdf>
Description
Propagate labels using Zhu, Ghahramani, Lafferty (2003) algorithm, "Semi-Supervised Learning Using Gaussian Fields and Harmonic Functions" <http://mlg.eng.cam.ac.uk/zoubin/papers/zgl.pdf>
Usage
propagateLabelsSolver(graph, labels, solver = "mumps")
Arguments
graph |
igraph graph object Graph input |
labels |
vector of factor or character labels, named by cell names |
solver |
Method of solver to use (default="mumps"), either "Matrix" or "mumps" (i.e. "rmumps::Rmumps") |
Value
result from Matrix::solve() or rmumps::Rmumps
Examples
propagateLabelsSolver(conosGraph, labels=cellAnnotations)
[Package sccore version 1.0.5 Index]