RWR {scapGNN}

Function that performs a random Walk with restart (RWR) on a given graph

Description

Function that performs a random Walk with restart (RWR) on a given graph

Usage

RWR(W, ind.positives, gamma = 0.6)

Arguments

W

: adjacency matrix of the graph

ind.positives

: indices of the "core" positive examples of the graph. They represent to the indices of W corresponding to the positive examples

gamma

: restart parameter (def: 0.6)

Value

a list with three elements: - p : the probability at the steady state - ind.positives : indices of the "core" positive examples of the graph (it is equal to the same input parameter - n.iter : number of performed iterations

a vector