scRNAtools_Geneexp {scRNAtools}

Expressed genes in scRNA sequencing data

Description

Extracted the genes expressed in cells. Users can set the threshold value.

Usage

scRNAtools_Geneexp(example, types, num)

Arguments

example

scRNA sequencing data without header.

types

Cell types in the example data.

num

Threshold value of expressed genes in appointed cell types. For example, we set 0.8 in example section.

Value

zset

Gene expression data required the threshold value.

Author(s)

Qian Yang

Examples

data(example)
types<-"1"
num<-0.8
scRNAtools_Geneexp(example,types,num)