ontoMultiMatch {scOntoMatch}

Core function of scOntoMatch Match the ontology annotation of multiple seurat objects

Description

Core function of scOntoMatch Match the ontology annotation of multiple seurat objects

Usage

ontoMultiMatch(obj_list, anno_col, onto_id_col, ont)

Arguments

obj_list

a namesd list of seurat objects to match

anno_col

the cell ontology text annotation column name

onto_id_col

if also have ontology id column for direct mapping

ont

ontologyIndex object

Value

a list of seurat objects with annotation ontology mapped to each-other in obs[['cell_ontology_mapped']]

Examples

## Not run: 
ontoMultiMatch(seurat_obj_list, ont, "ontology_name", 'ontology_id')

## End(Not run)