check_ontology_translate {scOntoMatch}

make sure ontology names are all translated to ontology ids while warning, consider manual reannotation

Description

make sure ontology names are all translated to ontology ids while warning, consider manual reannotation

Usage

check_ontology_translate(obj, onts, ont, anno_col)

Arguments

obj

seurat rds object

onts

ontology ids from translate

ont

ontologyIndex object

anno_col

annotation column in [e-mail] that is translated to onts ids

Value

do not return a value but output messages