plot_mod_and_lig {scITD}

Plot trio of associations between ligand expression, module eigengenes, and factor scores

Description

Plot trio of associations between ligand expression, module eigengenes, and factor scores

Usage

plot_mod_and_lig(container, factor_select, mod_ct, mod, lig_ct, lig)

Arguments

container

environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses

factor_select

numeric The factor to use

mod_ct

character The name of the cell type for the corresponding module

mod

numeric The number of the corresponding module

lig_ct

character The name of the cell type where the ligand is expressed

lig

character The name of the ligand to use

Value

A cowplot figure of ggplot objects for the three associations scatter plots.