plot_gsea_hmap {scITD}

Plot enriched gene sets from all cell types in a heatmap

Description

Plot enriched gene sets from all cell types in a heatmap

Usage

plot_gsea_hmap(container, factor_select, thresh)

Arguments

container

environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses

factor_select

numeric The factor to plot

thresh

numeric Pvalue threshold to use for including gene sets in the heatmap

Value

A stacked heatmap object from ComplexHeatmap.