merge_small_clusts {scITD}

Merge small subclusters into larger ones

Description

Merge small subclusters into larger ones

Usage

merge_small_clusts(con, clusts, min_cells_group)

Arguments

con

conos Object for the dataset with umap projection and groups as cell types

clusts

character The initially assigned subclusters by leiden clustering

min_cells_group

numeric The minimum allowable cluster size

Value

The subcluster labels with small clusters below the size threshold merged into the nearest larger cluster.