get_subclust_umap {scITD}

Get a figure to display subclusterings at multiple resolutions

Description

Get a figure to display subclusterings at multiple resolutions

Usage

get_subclust_umap(container, all_ctypes, all_res, n_col = 3)

Arguments

container

environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses

all_ctypes

character A vector of the cell types to include

all_res

numeric A vector of resolutions matching the all_ctypes parameter

n_col

numeric The number of columns to organize the figure into (default=3)

Value

The project container with a cowplot figure of all UMAP plots in container$plots$subc_umap_fig and the individual umap plots in container$plots$subc_umaps