get_leading_edge_genes {scITD}

Get the leading edge genes from GSEA results

Description

Get the leading edge genes from GSEA results

Usage

get_leading_edge_genes(container, factor_select, gsets, num_genes_per = 5)

Arguments

container

environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses

factor_select

numeric The factor to get results for

gsets

character A vector of gene set names to get leading edge genes for.

num_genes_per

numeric The maximum number of leading edge genes to get for each gene set (default=5)

Value

A named character vector of gene sets, with leading edge genes as the names.