get_indv_subtype_associations {scITD}

Compute subtype proportion-factor association p-values for all subclusters of a given major cell type

Description

Compute subtype proportion-factor association p-values for all subclusters of a given major cell type

Usage

get_indv_subtype_associations(container, donor_props, factor_select)

Arguments

container

environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses

donor_props

matrix Donor proportions of subtypes

factor_select

numeric The factor to get associations for

Value

A vector of association statistics each cell subtype against a selected factor.