scdeco.sim.cop {scDECO}R Documentation

Simulating from copula model

Description

Simulating from copula model

Usage

scdeco.sim.cop(
  marginals,
  x,
  eta1.true,
  eta2.true,
  beta1.true,
  beta2.true,
  alpha1.true,
  alpha2.true,
  tau.true,
  w = NULL
)

Arguments

marginals

provide vector of length 2 of which marginals to use

x

covariate matrix

eta1.true

zero-inflation parameters for marginal 1

eta2.true

zero-inflation parameters for marginal 2

beta1.true

mean coefficients for marginal 1

beta2.true

mean coefficients for marginal 2

alpha1.true

second parameter coefficients for marginal 1

alpha2.true

second parameter coefficients for marginal 2

tau.true

coefficients for correlation

w

(optional) covariate matrix for zero-inflation portion

Value

matrix with values simulated from copula model

Examples

n <- 2500
x.use = rnorm(n)
w.use = runif(n,-1,1)
eta1.use = c(-2.2, 0.7)
eta2.use = c(-2, 0.8)
beta1.use = c(1,0.5)
beta2.use = c(1,1)
alpha1.use = 7
alpha2.use = 3
tau.use = c(-0.2, .3)

marginals.use <- c("ZINB", "ZIGA")

y.use <- scdeco.sim.cop(marginals=marginals.use, x=x.use,
                    eta1.true=eta1.use, eta2.true=eta2.use,
                    beta1.true=beta1.use, beta2.true=beta2.use,
                    alpha1.true=alpha1.use, alpha2.true=alpha2.use,
                    tau.true=tau.use, w=w.use)

y.use[1:10,]


[Package scDECO version 0.1.0 Index]