find_specific_marker {scCAN} | R Documentation |
find_specific_marker
Description
Calculate cluster and cell type similarity based on the markers.
Usage
find_specific_marker(gene_name, f_list, type = "jacc")
Arguments
gene_name |
A list of markers belong to the cluster. |
f_list |
A list of markers belongs to a reference cell type. |
type |
A parameter to select the method to measure cluster and cell type similarity
. |
Value
A vector of probabilties of a cluster belongs to cell types.
[Package scCAN version 1.0.5 Index]