curate_markers {scCAN}

curate_markers

Description

Filter genes that have low p-value and fold-change.

Usage

curate_markers(
  whole_list,
  gene_names,
  wilcox_threshold = 0.001,
  logfc_threshold = 1.5
)

Arguments

whole_list

A list of markers for all clusters.

gene_names

All the gene names of the expression matrix.

wilcox_threshold

A threshold for p-value wilcox_threshold = 0.001 by default.

logfc_threshold

A threshold for fold-change logfc_threshold = 1.5 by default.

Value

A list of markers that are strong expressed for discovered clusters.