| eva_cal {scAnnotate} | R Documentation |
eva_cal
Description
calculate the F1 score of each cell population, mean of F1 score and overall accuracy
Usage
eva_cal(prediction, cell_label)
Arguments
prediction |
A vector of annotate cell type labels |
cell_label |
A vector of original cell type labels |
Value
A matrix contain the F1 score of each cell population, mean of F1 score and overall accuracy
Examples
data(predict_label)
data(pbmc2)
eva_cal(prediction = predict_label,cell_label = pbmc2[,1])
[Package scAnnotate version 0.3 Index]