extractFromScoringMatrix {sarp.snowprofile.alignment}

Extract from Scoring matrix

Description

Vectorized function to efficiently extract elements from scoring matrix of type data.frame

Usage

extractFromScoringMatrix(
  ScoringFrame,
  grainType1,
  grainType2,
  profile_handle = NULL
)

Arguments

ScoringFrame

Scoring matrix of type data.frame (needs to be of symmetric, matrix like format)

grainType1

character vector (yes, vector!) of grain type contained in ScoringFrame

grainType2

same as grainType1

profile_handle

character or numeric handle that links a potential warning message to the set of grain types, if an unknown grain type is encountered (must be of length = 1)

Value

numeric vector of length grainType1 with the elements of ScoringFrame that are defined by grainType1 and grainType2

Author(s)

fherla