write_gsi_sim_reference {rubias} | R Documentation |
Write a reference data frame to gsi_sim format baseline and repunits file
Description
Note, this is only intended to work with integer-valued alleles, at the moment. It was just written for testing and verifying that things are working correctly.
Usage
write_gsi_sim_reference(
ref,
gen_start_col,
baseout = "baseline.txt",
repout = "repunits.txt"
)
Arguments
ref |
reference data frame |
gen_start_col |
column in which the genetic data start |
baseout |
path to write the baseline file to. Required. |
repout |
path to write the repunits file to. Required. |
Examples
# create a temp directory to put example outputs
dd <- tempdir()
basefile <- file.path(dd, "baseline.txt")
repunitsfile <- file.path(dd, "repunits.txt")
# print those
basefile
repunitsfile
# note that in practice you will probably want to specify
# your own filepaths...
# run the function
write_gsi_sim_reference(alewife, 17, basefile, repunitsfile)
[Package rubias version 0.3.4 Index]