small_chinook_ref {rubias}

SNP data from selected chinook reference populations

Description

A small number of poulations from the Chinook salmon baseline data similar to that which can be downloaded from https://datadryad.org/stash/dataset/doi:10.5061/dryad.574sv. This data set includes 91 SNPs and 909 fish.

Format

A tbl_df-ed (from dplyr) data frame with 909 rows and 185 variables. The first three columns are

repunit (chr)

the reporting unit that the individual is in

pop (chr)

the population from which the individual was sampled

ID (chr)

Unique identifier of the individual fish

The remaining columns are two columns for each locus. These columns are named like, "Locus.1" and "Locus.2" for the first and second gene copies at that locus. For example, "Ots_104569-86.1" and "Ots_104569-86.2". The locus columns are ints and missing data is denoted by NA.

Source

https://datadryad.org/stash/dataset/doi:10.5061/dryad.574sv