close.rtmsBrukerMCFReader |
Manage an MCF reader file connection |
closeBrukerMCFReader |
Manage an MCF reader file connection |
emptySampleSet |
Generate an empty RTMS sample set |
exampleSpectrum |
Simple Example Spectrum |
getBrukerBAFAllMetadata |
Retrieve all metadata values from a Bruker BAF file |
getBrukerBAFMetadata |
Retrieve specific metadata values from a Bruker BAF file |
getBrukerBAFSample |
Extract a sample from a Bruker BAF directory |
getBrukerBAFSpectrum |
Extract a spectrum from a Bruker BAF directory |
getBrukerMCFAllMetadata |
Retrieve all metadata values from a Bruker MCF file |
getBrukerMCFIndices |
Get spot names and indices from a Bruker MCF file |
getBrukerMCFIntensities |
Retrieve peak intensities directly from an MCF file |
getBrukerMCFMetadata |
Retrieve specific metadata values from a Bruker BAF file |
getBrukerMCFSample |
Extract a sample from a Bruker MCF directory |
getBrukerMCFSampleSet |
Extract a sample set from a Bruker MCF directory |
getBrukerMCFSpectrum |
Extract a spectrum from a Bruker MCF directory |
getBrukerMCFSpots |
Get spot names and indices from a Bruker MCF file |
getSample |
Get an RTMS Sample |
getSample.rtmsBrukerBAFReader |
Extract a sample from a Bruker BAF directory |
getSample.rtmsBrukerMCFReader |
Extract a sample from a Bruker MCF directory |
getSample.rtmsSpectrum |
Extract a sample from an RTMS spectrum object |
getSampleFromSpectrum |
Extract a sample from an RTMS spectrum object |
getSampleSet |
Get an RTMS Sample Set |
getSampleSet.rtmsBrukerMCFReader |
Extract a sample set from a Bruker MCF directory |
getSpectrum |
Get an RTMS Spectrum |
getSpectrum.rtmsBrukerBAFReader |
Extract a spectrum from a Bruker BAF directory |
getSpectrum.rtmsBrukerMCFReader |
Extract a spectrum from a Bruker MCF directory |
measureSample |
Measure peaks in an RTMS sample |
measureSampleSet |
Measure peaks and samples in an RTMS sample set |
newBrukerBAFReader |
Open a Bruker single-acquisition BAF directory |
newBrukerMCFReader |
Open a Bruker multi-acquisition MCF directory |
plotRtmsSample |
Plot an RTMS sample object |
plotRtmsSampleSet |
Plot an RTMS sample set object |
plotRtmsSpectrum |
Plot an RTMS spectrum object |
reopen |
Reopen a reader object |
reopen.rtmsBrukerMCFReader |
Manage an MCF reader file connection |
reopenBrukerMCFReader |
Manage an MCF reader file connection |
rep.rtmsSample |
Functions for creating and manipulating samples and sample sets |
rep.rtmsSampleSet |
Functions for creating and manipulating samples and sample sets |
rtmsPeak |
Create an RTMS m/z Peak Object |
rtmsPeakList |
Create a list of RTMS m/z peak objects |
rtmsSpectrum |
Create a new RTMS spectrum |
sampleAndSampleSet |
Functions for creating and manipulating samples and sample sets |
[.rtmsSampleSet |
Functions for creating and manipulating samples and sample sets |
[[.rtmsSampleSet |
Functions for creating and manipulating samples and sample sets |
[[<-.rtmsSampleSet |
Functions for creating and manipulating samples and sample sets |