Realized Relatedness Estimation and Simulation
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Documentation for package ‘rres’ version 1.1
Help Pages
| check.pedinfo | Check pedigree information. |
| fgl2ibd | Score IBD state. |
| fgl2relatedness | Score pairwise relatedness. |
| get.pedindex | Get pedigree index. |
| grm.matrix | GRM for multiple individuals |
| grm.pair | GRM for a pair of individuals. |
| ibd.length | Score IBD length. |
| ibd.marker | Score IBD sharing at a list of marker positions. |
| ibd.proportion | Score IBD proportion. |
| ibd.segment | Score IBD sharing by segment. |
| ld.weights | LD weights |
| populate.snp | Populate SNPs. |
| read.plink.binary | Read PLINK binary file. |
| read.plink.text | Read PLINK text file. |
| recode.ibd | Recode IBD sharing. |
| recode.snpdata | Recode SNP marker data. |
| sim.haplotype | Simulate artificial haplotypes. |
| sim.recomb | Simulate inheritance on a given pedigree. |
| write.ibdhaplo | Write IBDHAPLO |