as_ANTsTransform {rpyANTs}

Convert to 'ANTsTransform'

Description

Convert to 'ANTsTransform'

Usage

as_ANTsTransform(x, ...)

## Default S3 method:
as_ANTsTransform(x, dimension = 3, ...)

## S3 method for class 'ants.core.ants_transform.ANTsTransform'
as_ANTsTransform(x, ...)

## S3 method for class 'ants.core.ants_image.ANTsImage'
as_ANTsTransform(x, ...)

## S3 method for class 'numpy.ndarray'
as_ANTsTransform(x, ...)

## S3 method for class 'character'
as_ANTsTransform(x, ...)

Arguments

x

'affine' matrix or 'numpy' array, character path to the matrix, 'ANTsTransform', 'ANTsImage' as displacement field.

...

passed to other methods

dimension

expected transform space dimension; default is 3

Value

An 'ANTsTransform' object

Examples

if(interactive() && ants_available()) {

  mat <- matrix(c(
    0, -1, 0, 128,
    1, 0, 0, -128,
    0, 0, -1, 128,
    0, 0,  0,   1
  ), ncol = 4, byrow = TRUE)

  trans <- as_ANTsTransform(mat)
  trans

  # apply transform
  trans$apply_to_point(c(120, 400, 1))

  # same results
  mat %*% c(120, 400, 1, 1)

  trans[] == mat

}